benchmarking: moved frontend calls and sending postfixExprs+vars outside to drastically reduce amount of calculations
Some checks are pending
CI / Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} (x64, ubuntu-latest, 1.10) (push) Waiting to run
CI / Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} (x64, ubuntu-latest, 1.6) (push) Waiting to run
CI / Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} (x64, ubuntu-latest, pre) (push) Waiting to run
Some checks are pending
CI / Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} (x64, ubuntu-latest, 1.10) (push) Waiting to run
CI / Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} (x64, ubuntu-latest, 1.6) (push) Waiting to run
CI / Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} (x64, ubuntu-latest, pre) (push) Waiting to run
This commit is contained in:
@ -22,36 +22,45 @@ export evaluate_gpu
|
||||
#
|
||||
|
||||
# Evaluate Expressions on the GPU
|
||||
function interpret_gpu(exprs::Vector{Expr}, X::Matrix{Float32}, p::Vector{Vector{Float32}}; repetitions=1)::Matrix{Float32}
|
||||
@assert axes(exprs) == axes(p)
|
||||
ncols = size(X, 2)
|
||||
function interpret_gpu(expressions::Vector{Expr}, X::Matrix{Float32}, p::Vector{Vector{Float32}}; repetitions=1)::Matrix{Float32}
|
||||
@assert axes(expressions) == axes(p)
|
||||
variableCols = size(X, 2)
|
||||
variableRows = size(X, 1)
|
||||
|
||||
results = Matrix{Float32}(undef, ncols, length(exprs))
|
||||
# TODO: create CuArray for variables here already, as they never change
|
||||
# could/should be done even before calling this, but I guess it would be diminishing returns
|
||||
# TODO: test how this would impact performance, if it gets faster, adapt implementation section
|
||||
# TODO: create CuArray for expressions here already. They also do not change over the course of parameter optimisation and therefore a lot of unnecessary calls to expr_to_postfix can be save (even though a cache is used, this should still be faster)
|
||||
variables = CuArray(X)
|
||||
|
||||
exprs = Vector{ExpressionProcessing.PostfixType}(undef, length(expressions))
|
||||
@inbounds Threads.@threads for i in eachindex(expressions)
|
||||
exprs[i] = ExpressionProcessing.expr_to_postfix(expressions[i])
|
||||
end
|
||||
cudaExprs = Utils.create_cuda_array(exprs, ExpressionProcessing.ExpressionElement(EMPTY, 0)) # column corresponds to data for one expression;
|
||||
exprsLength = length(exprs)
|
||||
exprsInnerLength = Utils.get_max_inner_length(exprs)
|
||||
|
||||
results = Matrix{Float32}(undef, variableCols, length(exprs))
|
||||
for i in 1:repetitions # Simulate parameter tuning -> local search (X remains the same, p gets changed in small steps and must be performed sequentially, which it is with this impl)
|
||||
results = Interpreter.interpret(exprs, X, p)
|
||||
results = Interpreter.interpret(cudaExprs, exprsLength, exprsInnerLength, variables, variableCols, variableRows, p)
|
||||
end
|
||||
|
||||
return results
|
||||
end
|
||||
|
||||
# Convert Expressions to PTX Code and execute that instead
|
||||
function evaluate_gpu(exprs::Vector{Expr}, X::Matrix{Float32}, p::Vector{Vector{Float32}}; repetitions=1)::Matrix{Float32}
|
||||
@assert axes(exprs) == axes(p)
|
||||
ncols = size(X, 2)
|
||||
function evaluate_gpu(expressions::Vector{Expr}, X::Matrix{Float32}, p::Vector{Vector{Float32}}; repetitions=1)::Matrix{Float32}
|
||||
@assert axes(expressions) == axes(p)
|
||||
variableCols = size(X, 2)
|
||||
variableRows = size(X, 1)
|
||||
|
||||
results = Matrix{Float32}(undef, ncols, length(exprs))
|
||||
# TODO: create CuArray for variables here already, as they never change
|
||||
# could/should be done even before calling this, but I guess it would be diminishing returns
|
||||
# TODO: test how this would impact performance, if it gets faster, adapt implementation section
|
||||
# TODO: create CuArray for expressions here already. They also do not change over the course of parameter optimisation and therefore a lot of unnecessary calls to expr_to_postfix can be save (even though a cache is used, this should still be faster)
|
||||
variables = CuArray(X)
|
||||
|
||||
exprs = Vector{ExpressionProcessing.PostfixType}(undef, length(expressions))
|
||||
@inbounds Threads.@threads for i in eachindex(expressions)
|
||||
exprs[i] = ExpressionProcessing.expr_to_postfix(expressions[i])
|
||||
end
|
||||
|
||||
results = Matrix{Float32}(undef, variableCols, length(exprs))
|
||||
for i in 1:repetitions # Simulate parameter tuning -> local search (X remains the same, p gets changed in small steps and must be performed sequentially, which it is with this impl)
|
||||
results = Transpiler.evaluate(exprs, X, p)
|
||||
results = Transpiler.evaluate(exprs, variables, variableCols, variableRows, p)
|
||||
end
|
||||
|
||||
return results
|
||||
|
@ -22,7 +22,6 @@ const PostfixType = Vector{ExpressionElement}
|
||||
"
|
||||
Converts a julia expression to its postfix notation.
|
||||
NOTE: All 64-Bit values will be converted to 32-Bit. Be aware of the lost precision.
|
||||
NOTE: This function is not thread save, especially cache access is not thread save
|
||||
"
|
||||
function expr_to_postfix(expression::Expr)::PostfixType
|
||||
expr = expression
|
||||
|
@ -8,31 +8,25 @@ export interpret
|
||||
|
||||
"Interprets the given expressions with the values provided.
|
||||
# Arguments
|
||||
- expressions::Vector{ExpressionProcessing.PostfixType} : The expressions to execute in postfix form
|
||||
- variables::Matrix{Float32} : The variables to use. Each column is mapped to the variables x1..xn
|
||||
- cudaExprs::CuArray{ExpressionProcessing.PostfixType} : The expressions to execute in postfix form and already sent to the GPU. The type information in the signature is missing, because creating a CuArray{ExpressionProcessing.PostfixType} results in a mor everbose type definition
|
||||
- cudaVars::CuArray{Float32} : The variables to use. Each column is mapped to the variables x1..xn. The type information is missing due to the same reasons as cudaExprs
|
||||
- parameters::Vector{Vector{Float32}} : The parameters to use. Each Vector contains the values for the parameters p1..pn. The number of parameters can be different for every expression
|
||||
- kwparam ```frontendCache```: The cache that stores the (partial) results of the frontend
|
||||
"
|
||||
function interpret(expressions::Vector{Expr}, variables::Matrix{Float32}, parameters::Vector{Vector{Float32}})::Matrix{Float32}
|
||||
exprs = Vector{ExpressionProcessing.PostfixType}(undef, length(expressions))
|
||||
@inbounds for i in eachindex(expressions)
|
||||
exprs[i] = ExpressionProcessing.expr_to_postfix(expressions[i])
|
||||
end
|
||||
function interpret(cudaExprs, numExprs::Integer, exprsInnerLength::Integer,
|
||||
cudaVars, variableColumns::Integer, variableRows::Integer, parameters::Vector{Vector{Float32}})::Matrix{Float32}
|
||||
|
||||
variableCols = size(variables, 2) # number of variable sets to use for each expression
|
||||
cudaVars = CuArray(variables)
|
||||
cudaParams = Utils.create_cuda_array(parameters, NaN32) # column corresponds to data for one expression
|
||||
cudaExprs = Utils.create_cuda_array(exprs, ExpressionElement(EMPTY, 0)) # column corresponds to data for one expression;
|
||||
# put into seperate cuArray, as this is static and would be inefficient to send seperatly to each kernel
|
||||
cudaStepsize = CuArray([Utils.get_max_inner_length(exprs), Utils.get_max_inner_length(parameters), size(variables, 1)]) # max num of values per expression; max nam of parameters per expression; number of variables per expression
|
||||
cudaStepsize = CuArray([exprsInnerLength, Utils.get_max_inner_length(parameters), variableRows]) # max num of values per expression; max nam of parameters per expression; number of variables per expression
|
||||
|
||||
# each expression has nr. of variable sets (nr. of columns of the variables) results and there are n expressions
|
||||
cudaResults = CuArray{Float32}(undef, variableCols, length(exprs))
|
||||
cudaResults = CuArray{Float32}(undef, variableColumns, numExprs)
|
||||
|
||||
# Start kernel for each expression to ensure that no warp is working on different expressions
|
||||
@inbounds Threads.@threads for i in eachindex(exprs)
|
||||
numThreads = min(variableCols, 256)
|
||||
numBlocks = cld(variableCols, numThreads)
|
||||
@inbounds Threads.@threads for i in 1:numExprs # multithreaded to speedup dispatching (seems to have improved performance)
|
||||
numThreads = min(variableColumns, 256)
|
||||
numBlocks = cld(variableColumns, numThreads)
|
||||
|
||||
@cuda threads=numThreads blocks=numBlocks fastmath=true interpret_expression(cudaExprs, cudaVars, cudaParams, cudaResults, cudaStepsize, i)
|
||||
end
|
||||
|
@ -12,10 +12,7 @@ const Operand = Union{Float32, String} # Operand is either fixed value or regist
|
||||
- kwparam ```frontendCache```: The cache that stores the (partial) results of the frontend, to speedup the pre-processing
|
||||
- kwparam ```frontendCache```: The cache that stores the result of the transpilation. Useful for parameter optimisation, as the same expression gets executed multiple times
|
||||
"
|
||||
function evaluate(expressions::Vector{Expr}, variables::Matrix{Float32}, parameters::Vector{Vector{Float32}})::Matrix{Float32}
|
||||
varRows = size(variables, 1)
|
||||
variableCols = size(variables, 2)
|
||||
# kernels = Vector{CuFunction}(undef, length(expressions))
|
||||
function evaluate(expressions::Vector{ExpressionProcessing.PostfixType}, cudaVars::CuArray{Float32}, variableColumns::Integer, variableRows::Integer, parameters::Vector{Vector{Float32}})::Matrix{Float32}
|
||||
|
||||
# TODO: test this again with multiple threads. The first time I tried, I was using only one thread
|
||||
# Test this parallel version again when doing performance tests. With the simple "functionality" tests this took 0.03 seconds while sequential took "0.00009" seconds
|
||||
@ -35,7 +32,7 @@ function evaluate(expressions::Vector{Expr}, variables::Matrix{Float32}, paramet
|
||||
|
||||
# formattedExpr = ExpressionProcessing.expr_to_postfix(expressions[i])
|
||||
|
||||
# kernel = transpile(formattedExpr, varRows, Utils.get_max_inner_length(parameters), variableCols, i-1) # i-1 because julia is 1-based but PTX needs 0-based indexing
|
||||
# kernel = transpile(formattedExpr, varRows, Utils.get_max_inner_length(parameters), variableColumns, i-1) # i-1 because julia is 1-based but PTX needs 0-based indexing
|
||||
|
||||
# linker = CuLink()
|
||||
# add_data!(linker, "ExpressionProcessing", kernel)
|
||||
@ -48,14 +45,13 @@ function evaluate(expressions::Vector{Expr}, variables::Matrix{Float32}, paramet
|
||||
# @lock cacheLock transpilerCache[expressions[i]] = kernels[i]
|
||||
# end
|
||||
|
||||
cudaVars = CuArray(variables) # maybe put in shared memory (see PerformanceTests.jl for more info)
|
||||
cudaParams = Utils.create_cuda_array(parameters, NaN32) # maybe make constant (see PerformanceTests.jl for more info)
|
||||
|
||||
# each expression has nr. of variable sets (nr. of columns of the variables) results and there are n expressions
|
||||
cudaResults = CuArray{Float32}(undef, variableCols, length(expressions))
|
||||
cudaResults = CuArray{Float32}(undef, variableColumns, length(expressions))
|
||||
|
||||
threads = min(variableCols, 256)
|
||||
blocks = cld(variableCols, threads)
|
||||
threads = min(variableColumns, 256)
|
||||
blocks = cld(variableColumns, threads)
|
||||
|
||||
kernelName = "evaluate_gpu"
|
||||
# TODO: Implement batching as a middleground between "transpile everything and then run" and "tranpile one run one" even though cudacall is async
|
||||
@ -65,8 +61,8 @@ function evaluate(expressions::Vector{Expr}, variables::Matrix{Float32}, paramet
|
||||
# continue
|
||||
# end
|
||||
|
||||
formattedExpr = ExpressionProcessing.expr_to_postfix(expressions[i])
|
||||
kernel = transpile(formattedExpr, varRows, Utils.get_max_inner_length(parameters), variableCols, i-1, kernelName) # i-1 because julia is 1-based but PTX needs 0-based indexing
|
||||
# formattedExpr = ExpressionProcessing.expr_to_postfix(expressions[i])
|
||||
kernel = transpile(expressions[i], variableRows, Utils.get_max_inner_length(parameters), variableColumns, i-1, kernelName) # i-1 because julia is 1-based but PTX needs 0-based indexing
|
||||
|
||||
linker = CuLink()
|
||||
add_data!(linker, kernelName, kernel)
|
||||
|
@ -21,8 +21,16 @@ parameters[2][1] = 5.0
|
||||
parameters[2][2] = 0.0
|
||||
|
||||
function testHelper(expression::Expr, variables::Matrix{Float32}, parameters::Vector{Vector{Float32}}, expectedResult)
|
||||
exprs = Vector([expression])
|
||||
result = Interpreter.interpret(exprs, variables, parameters)
|
||||
exprs = [ExpressionProcessing.expr_to_postfix(expression)]
|
||||
cudaExprs = Utils.create_cuda_array(exprs, ExpressionProcessing.ExpressionElement(EMPTY, 0))
|
||||
exprsLength = length(exprs)
|
||||
exprsInnerLength = Utils.get_max_inner_length(exprs)
|
||||
|
||||
X = CuArray(variables)
|
||||
variableCols = size(variables, 2)
|
||||
variableRows = size(variables, 1)
|
||||
|
||||
result = Interpreter.interpret(cudaExprs, exprsLength, exprsInnerLength, X, variableCols, variableRows, parameters)
|
||||
|
||||
expectedResult32 = convert(Float32, expectedResult)
|
||||
@test isequal(result[1,1], expectedResult32)
|
||||
@ -127,8 +135,16 @@ end
|
||||
expr1 = :((x1 + 5) * p1 - 3 / abs(x2) + (2^4) - log(8))
|
||||
expr2 = :(1 + 5 * x1 - 10^2 + (p1 - p2) / 9 + exp(x2))
|
||||
|
||||
exprs = Vector([expr1, expr2])
|
||||
result = Interpreter.interpret(exprs, var, param)
|
||||
exprs = [ExpressionProcessing.expr_to_postfix(expr1), ExpressionProcessing.expr_to_postfix(expr2)]
|
||||
cudaExprs = Utils.create_cuda_array(exprs, ExpressionProcessing.ExpressionElement(EMPTY, 0))
|
||||
exprsLength = length(exprs)
|
||||
exprsInnerLength = Utils.get_max_inner_length(exprs)
|
||||
|
||||
X = CuArray(var)
|
||||
variableCols = size(var, 2)
|
||||
variableRows = size(var, 1)
|
||||
|
||||
result = Interpreter.interpret(cudaExprs, exprsLength, exprsInnerLength, X, variableCols, variableRows, param)
|
||||
|
||||
# var set 1
|
||||
@test isapprox(result[1,1], 37.32, atol=0.01) # expr1
|
||||
|
@ -10,6 +10,7 @@ using .ExpressionProcessing
|
||||
|
||||
include("parser.jl") # to parse expressions from a file
|
||||
|
||||
# ATTENTAION: Evaluation information at the very bottom
|
||||
const BENCHMARKS_RESULTS_PATH = "./results-fh-new"
|
||||
|
||||
# Number of expressions can get really big (into millions)
|
||||
@ -68,7 +69,7 @@ suite["GPUT"]["nikuradse_1"] = @benchmarkable evaluate_gpu(exprs, X_t, parameter
|
||||
|
||||
loadparams!(suite, BenchmarkTools.load("params.json")[1], :samples, :evals, :gctrial, :time_tolerance, :evals_set, :gcsample, :seconds, :overhead, :memory_tolerance)
|
||||
|
||||
results = run(suite, verbose=true, seconds=28800) # 8 hour timeout
|
||||
results = run(suite, verbose=true, seconds=43200) # 12 hour timeout
|
||||
resultsCPU = BenchmarkTools.load("$BENCHMARKS_RESULTS_PATH/cpu.json")[1]
|
||||
|
||||
if compareWithCPU
|
||||
@ -139,3 +140,8 @@ else
|
||||
println(oldVsGPUT_std)
|
||||
end
|
||||
|
||||
|
||||
|
||||
# Initial implementation:
|
||||
# - Interpreter: no cache; 256 blocksize; exprs pre-processed and sent to GPU on every call; vars sent on every call; frontend + dispatch are multithreaded
|
||||
# - Transpiler: no cahce; 256 blocksize; exprs pre-processed and transpiled on every call; vars sent on every call; frontend + transpilation + dispatch are multithreaded
|
@ -41,19 +41,15 @@ parameters[2][1] = 5.0
|
||||
parameters[2][2] = 0.0
|
||||
parameters[3][1] = 16.0
|
||||
|
||||
@testset "TEMP" begin
|
||||
return
|
||||
exprs = [:(x1 + p1)]
|
||||
vars = Matrix{Float32}(undef, 1, 1)
|
||||
params = Vector{Vector{Float32}}(undef, 1)
|
||||
|
||||
vars[1, 1] = 1
|
||||
params[1] = [1]
|
||||
Transpiler.evaluate(exprs, vars, params)
|
||||
end
|
||||
|
||||
@testset "Test transpiler evaluation" begin
|
||||
results = Transpiler.evaluate(expressions, variables, parameters)
|
||||
variableCols = size(variables, 2)
|
||||
variableRows = size(variables, 1)
|
||||
X = CuArray(variables)
|
||||
|
||||
exprs = [ExpressionProcessing.expr_to_postfix(expressions[1]), ExpressionProcessing.expr_to_postfix(expressions[2]), ExpressionProcessing.expr_to_postfix(expressions[3])]
|
||||
|
||||
results = Transpiler.evaluate(exprs, X, variableCols, variableRows, parameters)
|
||||
|
||||
# dump(expressions[3]; maxdepth=10)
|
||||
# Expr 1:
|
||||
|
@ -12,7 +12,7 @@ include(joinpath(baseFolder, "src", "Transpiler.jl"))
|
||||
@testset "Functionality tests" begin
|
||||
# include("ExpressionProcessingTests.jl")
|
||||
# include("InterpreterTests.jl")
|
||||
# include("TranspilerTests.jl")
|
||||
include("TranspilerTests.jl")
|
||||
end
|
||||
|
||||
|
||||
@ -22,5 +22,5 @@ end
|
||||
|
||||
@testset "Performance tests" begin
|
||||
# include("PerformanceTuning.jl")
|
||||
include("PerformanceTests.jl")
|
||||
# include("PerformanceTests.jl")
|
||||
end
|
Reference in New Issue
Block a user